1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g102820.4.1

Solyc01g102820.4.1 (ISPD, ATMEPCT, MCT,...)


Aliases : ISPD, ATMEPCT, MCT, Solyc01g102820

Description : 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase


Gene families : OG0005475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005475_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g102820.4.1

Target Alias Description ECC score Gene Family Method Actions
Cre16.g679669 ISPD, ATMEPCT, MCT Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species
Ehy_g14865 ISPD, ATMEPCT, MCT 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01023131001 ISPD, ATMEPCT, MCT Secondary metabolism.terpenoids.methylerythritol... 0.07 OrthoFinder output from all 47 species
Gb_01940 ISPD, ATMEPCT, MCT 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 0.03 OrthoFinder output from all 47 species
Len_g28964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g06780.1 ISPD, ATMEPCT, MCT 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0070567 cytidylyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR034683 IspD/TarI 83 303
No external refs found!