- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc01g102690
Description : Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana (sp|q9m2y7|pp274_arath : 929.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00032p00176600 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00190360 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00098p00167700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68930 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G33680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G13880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G49142 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G15720 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G21300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G08490 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G65570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g003860 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036755 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060792 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17869 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37757 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02416 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11424 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g15073 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g23903 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24667 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06645 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06903 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07446 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11263 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g23735 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30088 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g39618 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g54704 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55221 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g60956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05294 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g06025 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22061 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26963 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27260 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27895 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g33250 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36683 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g37587 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37946 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03671 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g38565 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene66051.t1 | OTP84, Aspi01Gene66051 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001369 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: CDS=172-2610 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030525 | No alias | not classified & original description: CDS=1-2520 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05884 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07378 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g18613 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19787 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g47996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G000400.1 | Ceric.07G000400 | not classified & original description: pacid=50627195... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G024400.1 | Ceric.07G024400 | not classified & original description: pacid=50626298... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G047500.1 | Ceric.10G047500 | not classified & original description: pacid=50612222... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.16G011900.1 | EMB2758, Ceric.16G011900 | not classified & original description: pacid=50589297... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z005100.1 | Ceric.1Z005100 | not classified & original description: pacid=50567700... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05525 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18405 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g19085 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28151 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30281 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35442 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g36003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g42856 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g43220 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08824 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17044 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26847 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36991 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45946 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47804 | MEF21 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g03929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09596 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g17526 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g51445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12101 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g13211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16748 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18152 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19916 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23635 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030836001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g41530.1 | LOC_Os03g41530 | ssDNA-binding protein (OSB) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g08650.1 | LOC_Os06g08650 | Pentatricopeptide repeat-containing protein At2g03380,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g44299.1 | OTP81, LOC_Os07g44299 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g28830.1 | LOC_Os08g28830 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g30760.1 | LOC_Os10g30760 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g40920.1 | LOC_Os10g40920 | RNA editing factor (MEF13) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g45410.1 | LOC_Os11g45410 | Pentatricopeptide repeat-containing protein At4g13650... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g05167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05316 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g42874 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55821 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16404 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g23499 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_109134g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_40997g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| MA_6527g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_71104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g06173 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g09823 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14691 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17466 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g25636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28787 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11891 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19928 | CRR2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g24442 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g27204 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g40890 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41304 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g13036 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63645 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16135 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g05896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06929 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g36011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g36024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59277 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002236 | No alias | not classified & original description: CDS=1-2649 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015571 | No alias | not classified & original description: CDS=1-1581 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017029 | No alias | not classified & original description: CDS=1-2337 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18869 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g27799 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21929 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e010182_P001 | Zm00001e010182 | Pentatricopeptide repeat-containing protein At2g36980,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011923_P001 | Zm00001e011923 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027978_P001 | MEF1, Zm00001e027978 | RNA editing factor (MEF1) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032242_P001 | Zm00001e032242 | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035817_P001 | Zm00001e035817 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036537_P001 | Zm00001e036537 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041987_P001 | Zm00001e041987 | Pentatricopeptide repeat-containing protein At2g37320... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 584 | 710 |
| IPR002885 | Pentatricopeptide_repeat | 384 | 409 |
| IPR002885 | Pentatricopeptide_repeat | 108 | 137 |
| IPR002885 | Pentatricopeptide_repeat | 555 | 579 |
| IPR002885 | Pentatricopeptide_repeat | 179 | 202 |
| IPR002885 | Pentatricopeptide_repeat | 77 | 102 |
| IPR002885 | Pentatricopeptide_repeat | 484 | 508 |
| IPR002885 | Pentatricopeptide_repeat | 208 | 236 |
| IPR002885 | Pentatricopeptide_repeat | 410 | 457 |
| IPR002885 | Pentatricopeptide_repeat | 307 | 353 |
| No external refs found! |