Solyc01g102560.2.1 (EIF3C, EIF3C-1,...)


Aliases : EIF3C, EIF3C-1, ATTIF3C1, TIF3C1, ATEIF3C-1, Solyc01g102560

Description : component eIF3c of eIF3 mRNA-to-PIC binding complex


Gene families : OG0003384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003384_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g102560.2.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00256050 EIF3C, EIF3C-1,... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Als_g01154 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Cba_g11846 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Ehy_g25586 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Mp6g05320.1 EIF3C, EIF3C-1,... component eIF3c of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Ore_g17349 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Pp3c13_10890V3.1 EIF3C, EIF3C-1,... eukaryotic translation initiation factor 3C 0.03 OrthoFinder output from all 47 species
Pp3c3_8500V3.1 EIF3C, EIF3C-1,... eukaryotic translation initiation factor 3C 0.05 OrthoFinder output from all 47 species
Sam_g52345 No alias component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Spa_g22534 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Spa_g46365 EIF3C, EIF3C-1,... component *(eIF3c) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e007319_P001 EIF3C, EIF3C-1,... component eIF3c of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
MF GO:0031369 translation initiation factor binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR008905 EIF3C_N_dom 1 41
IPR000717 PCI_dom 49 177
No external refs found!