1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g100890.4.1

Solyc01g100890.4.1 (Solyc01g100890)


Aliases : Solyc01g100890

Description : solute transporter (UmamiT)


Gene families : OG0000138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100890.4.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00261210 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.05 OrthoFinder output from all 47 species
AMTR_s00018p00130630 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.04 OrthoFinder output from all 47 species
AMTR_s00055p00109080 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
AT1G09380 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 OrthoFinder output from all 47 species
AT5G13670 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 OrthoFinder output from all 47 species
Aev_g39360 WAT1 solute transporter *(UmamiT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50201 WAT1 solute transporter *(UmamiT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009805001 WAT1 Solute transport.carrier-mediated transport.DMT... 0.05 OrthoFinder output from all 47 species
GSVIVT01019717001 No alias External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
Gb_12953 WAT1 solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
Gb_22525 No alias solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
Gb_23832 No alias solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Gb_35669 No alias solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
LOC_Os01g36560.1 LOC_Os01g36560 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
LOC_Os02g02310.1 WAT1, LOC_Os02g02310 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52930.1 LOC_Os02g52930 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
LOC_Os06g01972.1 LOC_Os06g01972 solute transporter (UmamiT) 0.05 OrthoFinder output from all 47 species
LOC_Os06g49500.1 LOC_Os06g49500 solute transporter (UmamiT) 0.05 OrthoFinder output from all 47 species
LOC_Os10g14920.1 LOC_Os10g14920 solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
MA_10321189g0010 No alias solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
MA_14668g0010 No alias solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
MA_196512g0010 No alias solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
MA_53546g0010 No alias solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
MA_724597g0010 No alias solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
Pnu_g18156 No alias solute transporter *(UmamiT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25787 WAT1 solute transporter *(UmamiT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011130 No alias solute transporter *(UmamiT) & original description: CDS=1-702 0.02 OrthoFinder output from all 47 species
Smo34346 No alias Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
Solyc03g118900.3.1 Solyc03g118900 solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
Solyc10g078270.2.1 Solyc10g078270 solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
Zm00001e019535_P001 Zm00001e019535 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
Zm00001e025380_P001 WAT1, Zm00001e025380 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Zm00001e030202_P003 Zm00001e030202 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
Zm00001e036698_P007 Zm00001e036698 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR000620 EamA_dom 7 148
IPR000620 EamA_dom 188 326
No external refs found!