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Aliases : Solyc01g100450
Description : Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana (sp|o04504|ppr27_arath : 566.0)
Gene families : OG0002597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002597_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g100450.1.1 | |
| Cluster | HCCA: Cluster_155 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00048p00141020 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g01110... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00202160 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g55840... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00106p00105070 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025017001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037263001 | No alias | Pentatricopeptide repeat-containing protein At5g01110... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_03162 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13926 | No alias | group-II intron mitochondrial splicing factor (MISF26) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_20239 | No alias | Pentatricopeptide repeat-containing protein At5g40400... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g06910.1 | LOC_Os03g06910 | Pentatricopeptide repeat-containing protein At5g01110... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g19390.1 | LOC_Os05g19390 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| MA_111225g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_302333g0010 | No alias | Pentatricopeptide repeat-containing protein At5g55840... | 0.03 | OrthoFinder output from all 47 species | |
| MA_59385g0010 | No alias | Pentatricopeptide repeat-containing protein At3g54980,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_6175g0010 | No alias | Pentatricopeptide repeat-containing protein At5g01110... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc05g051340.3.1 | Solyc05g051340 | group-II intron mitochondrial splicing factor (MISF26) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 395 | 426 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 322 |
| IPR002885 | Pentatricopeptide_repeat | 328 | 377 |
| IPR002885 | Pentatricopeptide_repeat | 433 | 482 |
| IPR002885 | Pentatricopeptide_repeat | 503 | 552 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 269 |
| IPR002885 | Pentatricopeptide_repeat | 193 | 218 |
| No external refs found! |