Solyc01g100420.3.1 (Solyc01g100420)

Aliases : Solyc01g100420

Description : PrfB-type translation peptide chain release factor

Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g100420.3.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g040965	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Aev_g07867	No alias	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Aob_g08393	No alias	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0059.g034574	No alias	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Cba_g23243	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Ceric.08G069700.1	Ceric.08G069700	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Ehy_g09038	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01031232001	No alias	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
GSVIVT01033556001	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Gb_09148	No alias	PrfB-type translation peptide chain release factor	0.04	OrthoFinder output from all 47 species
Len_g16720	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Lfl_g01235	No alias	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Nbi_g10196	No alias	translation peptide chain release factor *(PrfB) &...	0.05	OrthoFinder output from all 47 species
Nbi_g12251	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Ore_g03628	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Ppi_g03735	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Sam_g48616	No alias	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Tin_g15390	No alias	translation peptide chain release factor *(PrfB) &...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	IEA	Interproscan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005139	PCRF	140	327
IPR000352	Pep_chain_release_fac_I	339	446

External Links

No external refs found!

Solyc01g100420.3.1 (Solyc01g100420)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation