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  5. Solyc01g100050.3.1

Solyc01g100050.3.1 (TPR3, Solyc01g100050)


Aliases : TPR3, Solyc01g100050

Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100050.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00159380 TPL, WSIP1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 OrthoFinder output from all 47 species
AMTR_s00051p00079490 TPR1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
Ala_g32947 TPL, WSIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16532 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40866.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g03400 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Dac_g14665 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Dde_g05960 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01015571001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
GSVIVT01017343001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.07 OrthoFinder output from all 47 species
Gb_37153 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Gb_39002 TPR2 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
LOC_Os01g15020.1 TPR2, LOC_Os01g15020 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
MA_10436445g0020 TPR1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
MA_366520g0010 TPL, WSIP1 Protein TPR2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ore_g35084 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Pir_g32525 TPR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50025 TPL, WSIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16347 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g26704 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Tin_g06694 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g28252 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005534 galactose binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0048029 monosaccharide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 913 946
IPR001680 WD40_repeat 451 484
No external refs found!