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  5. Solyc01g100040.3.1

Solyc01g100040.3.1 (Solyc01g100040)


Aliases : Solyc01g100040

Description : clade E phosphatase


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100040.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G03415 No alias Protein phosphatase 2C family protein 0.05 OrthoFinder output from all 47 species
Adi_g015304 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020272 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111376 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25704 No alias clade E phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g09003 No alias clade E phosphatase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60160.t1 Aspi01Gene60160 clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0390.g067708 No alias not classified & original description: CDS=176-1114 0.04 OrthoFinder output from all 47 species
Ceric.08G050200.1 Ceric.08G050200 clade E phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g04951 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02535 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26120 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_25676 No alias Probable protein phosphatase 2C 33 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g27220.1 LOC_Os02g27220 clade E phosphatase 0.03 OrthoFinder output from all 47 species
LOC_Os08g39100.1 LOC_Os08g39100 clade E phosphatase 0.05 OrthoFinder output from all 47 species
MA_7851434g0010 No alias clade E phosphatase 0.05 OrthoFinder output from all 47 species
MA_8698569g0010 No alias Probable protein phosphatase 2C 6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g15816 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34836 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08564 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11591 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19709 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10042 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13376 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29799 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014550_P002 Zm00001e014550 clade E phosphatase 0.05 OrthoFinder output from all 47 species
Zm00001e024356_P001 Zm00001e024356 clade E phosphatase 0.04 OrthoFinder output from all 47 species
Zm00001e031449_P002 Zm00001e031449 Probable protein phosphatase 2C 48 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 87 330
No external refs found!