Solyc01g099350.3.1 (ACBP4, Solyc01g099350)

Aliases : ACBP4, Solyc01g099350

Description : Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana (sp|q9ma55|acbp4_arath : 805.0)

Gene families : OG0001589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001589_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g099350.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G05420	ACBP4	acyl-CoA binding protein 4	0.23	OrthoFinder output from all 47 species
AT5G04420	No alias	Galactose oxidase/kelch repeat superfamily protein	0.09	OrthoFinder output from all 47 species
Adi_g012010	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g080803	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g080804	ACBP4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g107315	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07928	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.09	OrthoFinder output from all 47 species
Ala_g07521	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06500	ACBP4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33638	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13893	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.08	OrthoFinder output from all 47 species
Azfi_s0045.g029979	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0090.g042698	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Cba_g77449	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.23G004500.1	ACBP4, Ceric.23G004500	acyl-CoA-binding protein *(ACBP4/5) & original...	0.03	OrthoFinder output from all 47 species
Cre02.g074650	ACBP4	Acyl-CoA-binding domain-containing protein 4...	0.05	OrthoFinder output from all 47 species
Dcu_g08239	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g13338	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.11	OrthoFinder output from all 47 species
Dde_g04888	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01031116001	ACBP4	Acyl-CoA-binding domain-containing protein 4...	0.14	OrthoFinder output from all 47 species
Gb_28900	ACBP4	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.02	OrthoFinder output from all 47 species
LOC_Os02g57690.2	LOC_Os02g57690	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.04	OrthoFinder output from all 47 species
LOC_Os03g61930.1	ACBP4, LOC_Os03g61930	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.17	OrthoFinder output from all 47 species
LOC_Os12g35560.1	ACBP4, LOC_Os12g35560	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.07	OrthoFinder output from all 47 species
Len_g14881	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g04809	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.08	OrthoFinder output from all 47 species
MA_10436752g0010	ACBP4	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Mp3g16170.1	ACBP4	Acyl-CoA-binding domain-containing protein 4...	0.06	OrthoFinder output from all 47 species
Nbi_g11499	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g09453	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.05	OrthoFinder output from all 47 species
Pp3c14_17400V3.1	ACBP4, Pp3c14_17400	acyl-CoA binding protein 4	0.01	OrthoFinder output from all 47 species
Pp3c14_17403V3.1	ACBP4, Pp3c14_17403	acyl-CoA binding protein 4	0.03	OrthoFinder output from all 47 species
Sam_g10083	No alias	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g13845	No alias	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g13119	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g06644	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006279_P004	ACBP4, Zm00001e006279	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.22	OrthoFinder output from all 47 species
Zm00001e011691_P002	ACBP4, Zm00001e011691	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.21	OrthoFinder output from all 47 species
Zm00001e018275_P004	ACBP4, Zm00001e018275	Acyl-CoA-binding domain-containing protein 6 OS=Oryza...	0.07	OrthoFinder output from all 47 species
Zm00001e023562_P001	Zm00001e023562	Acyl-CoA-binding domain-containing protein 4...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEA	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0008289	lipid binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0033218	amide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0120227	acyl-CoA binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901567	fatty acid derivative binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006652	Kelch_1	185	226
IPR000582	Acyl-CoA-binding_protein	34	100

External Links

No external refs found!

Solyc01g099350.3.1 (ACBP4, Solyc01g099350)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation