1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g098770.1.1

Solyc01g098770.1.1 (Solyc01g098770)


Aliases : Solyc01g098770

Description : pepsin-type protease


Gene families : OG0000963 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g098770.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00080690 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.04 OrthoFinder output from all 47 species
Adi_g087943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19221 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g71185 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017894001 No alias Basic 7S globulin OS=Glycine max 0.04 OrthoFinder output from all 47 species
Gb_06554 No alias pepsin-type protease 0.03 OrthoFinder output from all 47 species
Gb_13040 No alias pepsin-type protease 0.04 OrthoFinder output from all 47 species
Gb_13041 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_13042 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
Gb_13050 No alias pepsin-type protease 0.03 OrthoFinder output from all 47 species
LOC_Os01g71090.1 LOC_Os01g71090 pepsin-type protease 0.04 OrthoFinder output from all 47 species
LOC_Os05g33400.1 LOC_Os05g33400 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Len_g45338 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18290 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19587 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14476 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23604 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080010.2.1 Solyc01g080010 pepsin-type protease 0.04 OrthoFinder output from all 47 species
Solyc02g063480.2.1 Solyc02g063480 pepsin-type protease 0.04 OrthoFinder output from all 47 species
Tin_g08768 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0006471 obsolete protein ADP-ribosylation IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR032799 TAXi_C 250 405
IPR032861 TAXi_N 50 226
No external refs found!