Solyc01g098750.3.1 (Solyc01g098750)


Aliases : Solyc01g098750

Description : Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana (sp|q8la32|lul4_arath : 308.0)


Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g098750.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G06140 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G19080 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g085386 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085387 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01642 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01738 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0017.g014549 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.05 OrthoFinder output from all 47 species
Cba_g00773 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G086300.1 Ceric.09G086300 E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001127.29 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g04523 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03893 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000020001 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01025175001 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g15000.1 LOC_Os03g15000 Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os05g33000.2 LOC_Os05g33000 Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Len_g02259 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12386 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04681 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11244 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11051 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02875 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017116 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc01g080080.3.1 Solyc01g080080 Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g50415 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03998 No alias E3 ubiquiTin ligase *(LOG2/LUL) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e031610_P001 Zm00001e031610 Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e038556_P001 Zm00001e038556 Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!