Solyc01g097110.2.1 (Solyc01g097110)

Aliases : Solyc01g097110

Description : meiotic crossover formation factor (FANCD2)

Gene families : OG0007524 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007524_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g097110.2.1
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0292.g063381	No alias	meiotic crossover formation factor *(FANCD2) & original...	0.03	OrthoFinder output from all 47 species
Cre10.g453650	No alias	No description available	0.05	OrthoFinder output from all 47 species
Gb_40796	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_40797	No alias	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Gb_40798	No alias	meiotic crossover formation factor (FANCD2)	0.07	OrthoFinder output from all 47 species
Gb_40799	No alias	meiotic crossover formation factor (FANCD2)	0.06	OrthoFinder output from all 47 species
Mp1g20410.1	No alias	meiotic crossover formation factor (FANCD2)	0.02	OrthoFinder output from all 47 species
Nbi_g24209	No alias	meiotic crossover formation factor *(FANCD2) & original...	0.02	OrthoFinder output from all 47 species
Tin_g10637	No alias	meiotic crossover formation factor *(FANCD2) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e011509_P002	Zm00001e011509	meiotic crossover formation factor (FANCD2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029448	FANCD2	1214	1481
IPR029448	FANCD2	107	894

External Links

No external refs found!