1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g097050.4.1

Solyc01g097050.4.1 (Solyc01g097050)


Aliases : Solyc01g097050

Description : R-loop reader protein (ALBA1/2)


Gene families : OG0001187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001187_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g097050.4.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g01526 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014774 No alias R-loop reader protein *(ALBA1/2) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g05649 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.54 No alias Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os12g30550.1 LOC_Os12g30550 R-loop reader protein (ALBA1/2) 0.07 OrthoFinder output from all 47 species
Msp_g03820 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16983 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54547 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039539_P003 Zm00001e039539 R-loop reader protein (ALBA1/2) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 39 101
No external refs found!