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  5. Solyc01g096840.3.1

Solyc01g096840.3.1 (EDE1, QWRF5, Solyc01g096840)


Aliases : EDE1, QWRF5, Solyc01g096840

Description : accessory component EDE1 of Augmin gamma-TuRC recruiting complex


Gene families : OG0000808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096840.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00037320 EDE1, QWRF5,... Cytoskeleton.microtubular network.microtubule Tubulin... 0.1 OrthoFinder output from all 47 species
Azfi_s0250.g060195 QWRF8 not classified & original description: CDS=8-2572 0.06 OrthoFinder output from all 47 species
Ceric.05G068400.1 QWRF8, Ceric.05G068400 not classified & original description: pacid=50577745... 0.04 OrthoFinder output from all 47 species
Cre02.g101750 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g10890 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21233 QWRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23431 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22714 QWRF8 component *(AUG8) of Augmin gamma-TuRC recruiting... 0.02 OrthoFinder output from all 47 species
Spa_g40845 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29553 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018954_P001 QWRF4, Zm00001e018954 Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007573 QWRF 264 550
No external refs found!