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  5. Solyc01g096750.1.1

Solyc01g096750.1.1 (AGO4, OCP11, Solyc01g096750)


Aliases : AGO4, OCP11, Solyc01g096750

Description : siRNA-integrating factor (AGO)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g096750.1.1

Target Alias Description ECC score Gene Family Method Actions
AT1G31290 AGO3 ARGONAUTE 3 0.03 OrthoFinder output from all 47 species
AT2G27880 AGO5 Argonaute family protein 0.02 OrthoFinder output from all 47 species
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40616 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23299.t1 AGO7, ZIP,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0074.g037455 PNH, AGO10, ZLL miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Ceric.30G040900.1 AGO4, OCP11,... siRNA-integrating factor *(AGO) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g43738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001941001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
GSVIVT01012490001 AGO7, ZIP Protein argonaute 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01012529001 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
GSVIVT01030512001 AGO6 Chromatin organisation.DNA methylation.canonical... 0.07 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.07 OrthoFinder output from all 47 species
GSVIVT01037488001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
LOC_Os03g33650.1 AGO7, ZIP, LOC_Os03g33650 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os03g58600.1 AGO5, LOC_Os03g58600 Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39640.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os07g09020.1 AGO5, LOC_Os07g09020 Protein argonaute 14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g08293 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06710 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Lfl_g35792 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g20400.1 AGO4, OCP11 siRNA-integrating factor (AGO) 0.04 OrthoFinder output from all 47 species
Zm00001e009631_P001 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e011432_P001 AGO5, Zm00001e011432 Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e017367_P001 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.03 OrthoFinder output from all 47 species
Zm00001e030606_P001 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR032474 Argonaute_N 28 186
IPR003100 PAZ_dom 252 380
IPR014811 ArgoL1 198 246
IPR003165 Piwi 535 842
IPR032472 ArgoL2 390 435
No external refs found!