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Aliases : Solyc01g096590
Description : component RPS20 of SSU proteome
Gene families : OG0001982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001982_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00105050 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.16 | OrthoFinder output from all 47 species | |
| AT3G45030 | No alias | Ribosomal protein S10p/S20e family protein | 0.22 | OrthoFinder output from all 47 species | |
| AT3G47370 | No alias | Ribosomal protein S10p/S20e family protein | 0.2 | OrthoFinder output from all 47 species | |
| AT5G62300 | No alias | Ribosomal protein S10p/S20e family protein | 0.21 | OrthoFinder output from all 47 species | |
| Ala_g32242 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Ala_g39099 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g08426 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g22907 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Als_g43556 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g00267 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g23202 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Azfi_s0104.g044711 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.10G040000.1 | Ceric.10G040000 | component *(uS10) of small ribosomal-subunit (SSU)... | 0.29 | OrthoFinder output from all 47 species | |
| Ceric.35G056300.1 | Ceric.35G056300 | component *(uS10) of small ribosomal-subunit (SSU)... | 0.08 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000842.28 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.2 | OrthoFinder output from all 47 species | |
| Cre16.g660150 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.23 | OrthoFinder output from all 47 species | |
| Dac_g24720 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g24923 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01018553001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.18 | OrthoFinder output from all 47 species | |
| LOC_Os03g14530.1 | LOC_Os03g14530 | component RPS20 of SSU proteome | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os06g04290.1 | LOC_Os06g04290 | component RPS20 of SSU proteome | 0.18 | OrthoFinder output from all 47 species | |
| LOC_Os10g08930.1 | LOC_Os10g08930 | component RPS20 of SSU proteome | 0.2 | OrthoFinder output from all 47 species | |
| MA_103406g0010 | No alias | component RPS20 of SSU proteome | 0.13 | OrthoFinder output from all 47 species | |
| MA_10429759g0010 | No alias | component RPS20 of SSU proteome | 0.19 | OrthoFinder output from all 47 species | |
| Mp2g09440.1 | No alias | component RPS20 of SSU proteome | 0.17 | OrthoFinder output from all 47 species | |
| Msp_g18247 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24560 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g24561 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Msp_g36291 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g39729 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21012 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g63796 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c1_21860V3.1 | Pp3c1_21860 | Ribosomal protein S10p/S20e family protein | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0064.g015887 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14098 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g23471 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.18 | OrthoFinder output from all 47 species | |
| Smo115495 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g27726 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.17 | OrthoFinder output from all 47 species | |
| Spa_g35271 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26346 | No alias | component *(uS10) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e001045_P001 | Zm00001e001045 | component RPS20 of SSU proteome | 0.2 | OrthoFinder output from all 47 species | |
| Zm00001e036579_P001 | Zm00001e036579 | component RPS20 of SSU proteome | 0.25 | OrthoFinder output from all 47 species | |
| Zm00001e038574_P001 | Zm00001e038574 | component RPS20 of SSU proteome | 0.24 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027486 | Ribosomal_S10_dom | 25 | 119 |
| No external refs found! |