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  5. Solyc01g096540.4.1

Solyc01g096540.4.1 (Solyc01g096540)


Aliases : Solyc01g096540

Description : regulatory protein (PATROL1) of CSC trafficking


Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096540.4.1

Target Alias Description ECC score Gene Family Method Actions
AT4G11670 No alias Protein of unknown function (DUF810) 0.03 OrthoFinder output from all 47 species
Aev_g02574 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Aev_g02581 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ala_g02603 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aspi01Gene26997.t1 Aspi01Gene26997 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34943.t1 Aspi01Gene34943 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07761 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ceric.14G063400.1 Ceric.14G063400 not classified & original description: pacid=50633761... 0.03 OrthoFinder output from all 47 species
Dcu_g04106 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
LOC_Os03g47930.1 LOC_Os03g47930 regulatory protein (PATROL1) of CSC trafficking 0.03 OrthoFinder output from all 47 species
Lfl_g12110 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
MA_10436391g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9285214g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g07000.1 No alias regulatory protein (PATROL1) of CSC trafficking 0.03 OrthoFinder output from all 47 species
Sam_g10575 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Sam_g49168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo92955 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g15138 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!