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  5. Solyc01g096480.2.1

Solyc01g096480.2.1 (TRX P, TRX z, Solyc01g096480)


Aliases : TRX P, TRX z, Solyc01g096480

Description : Z-type thioredoxin. PAP10/TrxZ cofactor of plastid-encoded RNA polymerase


Gene families : OG0002657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002657_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g096480.2.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT3G06730 TRX P, TRX z Thioredoxin z 0.19 OrthoFinder output from all 47 species
Aev_g00414 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Ala_g33335 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.04 OrthoFinder output from all 47 species
Als_g05982 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Ceric.35G032100.1 TRX P, TRX z,... cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.05 OrthoFinder output from all 47 species
GSVIVT01036664001 TRX P, TRX z RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 OrthoFinder output from all 47 species
Gb_29029 TRX P, TRX z Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.02 OrthoFinder output from all 47 species
LOC_Os08g29110.1 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.1 OrthoFinder output from all 47 species
Ore_g04907 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Pir_g19328 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Spa_g53450 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.04 OrthoFinder output from all 47 species
Zm00001e004249_P001 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 70 154
No external refs found!