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  5. Solyc01g096110.3.1

Solyc01g096110.3.1 (Solyc01g096110)


Aliases : Solyc01g096110

Description : no hits & (original description: none)


Gene families : OG0004504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096110.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00017150 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00022p00020890 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s01224p00002240 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT2G46560 No alias transducin family protein / WD-40 repeat family protein 0.13 OrthoFinder output from all 47 species
Adi_g010442 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
Aev_g19704 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Ala_g36990 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042626 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g38719 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.11 OrthoFinder output from all 47 species
Ceric.37G060800.1 Ceric.37G060800 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.33 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre04.g223000 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g39364 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g09007 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Dde_g11916 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g05116 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01027171001 No alias No description available 0.13 OrthoFinder output from all 47 species
LOC_Os01g37120.1 LOC_Os01g37120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g24856 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Lfl_g08851 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
MA_10437076g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_177408g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g21310.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g25735 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g25121 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g29898 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Pir_g15335 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g12196 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2320.g028304 No alias not classified & original description: CDS=1-1296 0.05 OrthoFinder output from all 47 species
Sam_g52672 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.1 OrthoFinder output from all 47 species
Spa_g22202 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022033 Rav1p_C 757 1475
No external refs found!