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  5. Solyc01g095820.2.1

Solyc01g095820.2.1 (Solyc01g095820)


Aliases : Solyc01g095820

Description : RING-H2 finger protein ATL22 OS=Arabidopsis thaliana (sp|q9skk8|atl22_arath : 87.4)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095820.2.1

Target Alias Description ECC score Gene Family Method Actions
AT1G49230 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G43430 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G35480 RHA3B RING-H2 finger A3B 0.05 OrthoFinder output from all 47 species
AT5G05280 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g071845 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ala_g15556 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g31953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g18398 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g29821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37467 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g10385 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g17168 ATRING1, RING1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g00299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013649 ATL4, TL4 not classified & original description: CDS=1-891 0.03 OrthoFinder output from all 47 species
Solyc04g014220.1.1 Solyc04g014220 RING-H2-class E3 ligase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 79 122
No external refs found!