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  5. Solyc01g095515.1.1

Solyc01g095515.1.1 (AGP16, ATAGP16, Solyc01g095515)


Aliases : AGP16, ATAGP16, Solyc01g095515

Description : no hits & (original description: none)


Gene families : OG0003275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095515.1.1
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT5G24105 AGP41 arabinogalactan protein 41 0.07 OrthoFinder output from all 47 species
Aspi01Gene62368.t1 AtAGP20, AGP20,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G026000.1 Ceric.02G026000 not classified & original description: pacid=50586127... 0.01 OrthoFinder output from all 47 species
GSVIVT01015262001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_00507 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g46850.1 LOC_Os01g46850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g59793 AtAGP20, AGP20 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016488 AGP16, ATAGP16 not classified & original description: CDS=83-316 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0806.g027738 AGP16, ATAGP16 not classified & original description: CDS=83-316 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s3300.g028712 AGP16, ATAGP16 not classified & original description: CDS=83-316 0.01 OrthoFinder output from all 47 species
Solyc10g011730.3.1 AtAGP20, AGP20,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g007045.1.1 AGP41, Solyc12g007045 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g03352 AGP41 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g01342 AGP16, ATAGP16 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR009424 AGP16/20/22/41 25 57
No external refs found!