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  5. Solyc01g091050.4.1

Solyc01g091050.4.1 (Solyc01g091050)


Aliases : Solyc01g091050

Description : pectin methylesterase


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091050.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.08 OrthoFinder output from all 47 species
AMTR_s00007p00101250 ATPMEPCRA,... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00161740 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00031200 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.04 OrthoFinder output from all 47 species
AT2G26440 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 OrthoFinder output from all 47 species
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.09 OrthoFinder output from all 47 species
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.04 OrthoFinder output from all 47 species
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.04 OrthoFinder output from all 47 species
Aev_g06111 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g08266 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g11030 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ala_g27377 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Als_g05028 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Als_g15513 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aob_g26087 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g35624 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene05823.t1 Aspi01Gene05823 EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene07394.t1 Aspi01Gene07394 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45157.t1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g043013 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0205.g057775 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0205.g057784 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G014700.1 Ceric.01G014700 EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Ceric.16G076000.1 PME44, ATPME44,... EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G055200.1 Ceric.19G055200 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G055900.1 Ceric.19G055900 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11844 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g41291 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.08 OrthoFinder output from all 47 species
Dde_g08691 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g48560 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Ehy_g09100 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g09868 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15129 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16152 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011699001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015000001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.08 OrthoFinder output from all 47 species
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037344001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037348001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037352001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
Gb_01422 ATPME3, PME3 pectin methylesterase 0.08 OrthoFinder output from all 47 species
Gb_03174 ATPME3, PME3 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_06354 ATPME3, PME3 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_10523 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_18512 ATPME3, PME3 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_21388 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_24214 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_24564 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_28387 ATPME3, PME3 pectin methylesterase 0.06 OrthoFinder output from all 47 species
LOC_Os01g21034.1 ATPME3, PME3,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os01g57854.1 ATPMEPCRA,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os02g54190.1 PME61, LOC_Os02g54190 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os06g09340.1 LOC_Os06g09340 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os08g12410.1 LOC_Os08g12410 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os08g34900.1 LOC_Os08g34900 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os11g08750.1 LOC_Os11g08750 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os11g36240.1 LOC_Os11g36240 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Len_g35632 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
MA_10372207g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_10435891g0010 PME61 pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.03 OrthoFinder output from all 47 species
MA_158002g0020 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_177306g0010 ATPME2, PME2 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_18093g0010 ATPMEPCRA, PMEPCRA Pectinesterase 2.1 OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
MA_2017g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_354248g0010 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_648837g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.02 OrthoFinder output from all 47 species
MA_931259g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp8g00060.1 ATPME2, PME2 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp8g09330.1 RHS12 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Nbi_g01365 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g08831 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g20165 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g22612 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g26986 ATPMEPCRB pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c8_3840V3.1 Pp3c8_3840 Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
Ppi_g16155 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g31109 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000947 No alias not classified & original description: CDS=1-831 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013432 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0255.g026821 No alias not classified & original description: CDS=300-1226 0.03 OrthoFinder output from all 47 species
Sam_g24349 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Smo114014 ATPMEPCRF, PMEPCRF Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
Smo154356 ATPMEPCRA, PMEPCRA Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Solyc01g099950.1.1 Solyc01g099950 pectin methylesterase 0.07 OrthoFinder output from all 47 species
Solyc02g014300.2.1 Solyc02g014300 pectin methylesterase 0.06 OrthoFinder output from all 47 species
Solyc02g081990.3.1 Solyc02g081990 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc03g083870.4.1 Solyc03g083870 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Solyc07g064170.3.1 ATPMEPCRA,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc07g064190.3.1 ATPMEPCRA,... pectin methylesterase 0.06 OrthoFinder output from all 47 species
Spa_g04243 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Tin_g14828 No alias EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Tin_g28885 ATPME2, PME2 EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e017514_P001 ATPMEPCRB, Zm00001e017514 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e017515_P001 ATPME2, PME2,... pectin methylesterase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 29 173
IPR000070 Pectinesterase_cat 217 510
No external refs found!