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  5. Solyc01g091010.3.1

Solyc01g091010.3.1 (AFO, YAB1, FIL, Solyc01g091010)


Aliases : AFO, YAB1, FIL, Solyc01g091010

Description : transcription factor (YABBY)


Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g091010.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 YAB2,... RNA biosynthesis.transcriptional activation.C2C2... 0.07 OrthoFinder output from all 47 species
AMTR_s00085p00032940 AFO, YAB1, FIL,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.07 OrthoFinder output from all 47 species
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.05 OrthoFinder output from all 47 species
GSVIVT01012246001 CRC RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
GSVIVT01015567001 YAB5 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01022586001 YAB2 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Gb_22423 YAB5 transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
LOC_Os02g42950.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.08 OrthoFinder output from all 47 species
LOC_Os03g11600.1 CRC, LOC_Os03g11600 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45330.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
LOC_Os10g36420.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
LOC_Os12g42610.1 YAB5, LOC_Os12g42610 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
MA_407206g0010 YAB5 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Solyc05g005240.2.1 INO, Solyc05g005240 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Zm00001e000845_P005 CRC, Zm00001e000845 transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Zm00001e003268_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Zm00001e004396_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.08 OrthoFinder output from all 47 species
Zm00001e007412_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.11 OrthoFinder output from all 47 species
Zm00001e012387_P001 YAB5, Zm00001e012387 transcription factor (YABBY) 0.07 OrthoFinder output from all 47 species
Zm00001e012388_P001 YAB5, Zm00001e012388 transcription factor (YABBY) 0.08 OrthoFinder output from all 47 species
Zm00001e012577_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.14 OrthoFinder output from all 47 species
Zm00001e017951_P002 YAB5, Zm00001e017951 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Zm00001e032845_P002 YAB2, Zm00001e032845 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Zm00001e035310_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
Zm00001e038717_P002 CRC, Zm00001e038717 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Zm00001e041322_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006780 YABBY 24 182
No external refs found!