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  5. Solyc01g090910.3.1

Solyc01g090910.3.1 (PVA12, Solyc01g090910)


Aliases : PVA12, Solyc01g090910

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090910.3.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g05641 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Als_g49608 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene42438.t1 Aspi01Gene42438 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Cba_g21723 PVA12 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Dcu_g35384 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01017816001 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Msp_g12102 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Sam_g07433 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Solyc01g098200.3.1 VAP27-2, Solyc01g098200 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Zm00001e014355_P001 Zm00001e014355 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018705_P003 VAP27-2, Zm00001e018705 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e023141_P002 Zm00001e023141 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e023177_P005 Zm00001e023177 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e041317_P001 PVA12, Zm00001e041317 contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000535 MSP_dom 7 111
No external refs found!