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  5. Solyc01g090530.3.1

Solyc01g090530.3.1 (DUO1, Solyc01g090530)


Aliases : DUO1, Solyc01g090530

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090530.3.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257950 AtMYB17, MYB17,... Transcription factor MYB41 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 OrthoFinder output from all 47 species
Adi_g107873 MYB43, AtMYB43 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07504 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14743 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19913 MYB86, ATMYB86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08795.t1 AtMYB82, MYB82,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23741.t1 AtMYB20, MYB20,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63727.t1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene71679.t1 MYB6, AtMYB6,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g00875 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.19G057300.1 ATMYB101,... not classified & original description: pacid=50576188... 0.03 OrthoFinder output from all 47 species
Ehy_g31541 MYB103, AtMYB103 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09986 AtMYB79, MYB79 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_34388 ATMYB5, MYB5 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g50770.1 MYB58, ATMYB58,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g04210.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37970.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g23620.1 AtMYB20, MYB20,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Lfl_g03025 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_499305g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8846750g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g19292 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ppi_g15316 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006431 MYB103,... not classified & original description: CDS=563-862 0.03 OrthoFinder output from all 47 species
Solyc01g005660.3.1 ATMYB5, MYB5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc08g065910.1.1 MYB84, RAX3,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Solyc11g011050.2.1 AtMYB20, MYB20,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 62 101
No external refs found!