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  5. Solyc01g090190.3.1

Solyc01g090190.3.1 (Solyc01g090190)


Aliases : Solyc01g090190

Description : RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana (sp|o23523|rgga_arath : 98.6)


Gene families : OG0000880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g090190.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00140620 evm_27.TU.AmTr_v1... RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species
AT4G17520 No alias Hyaluronan / mRNA binding family 0.04 OrthoFinder output from all 47 species
Adi_g054126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30074 No alias regulatory protein *(RGG) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001594 No alias not classified & original description: CDS=186-1532 0.03 OrthoFinder output from all 47 species
Dde_g01517 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Ehy_g25280 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g41880.1 LOC_Os01g41880 RGG repeats nuclear RNA binding protein A (Fragment)... 0.07 OrthoFinder output from all 47 species
Lfl_g25358 No alias regulatory protein *(RGG) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
MA_10428060g0020 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.03 OrthoFinder output from all 47 species
MA_141447g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9567870g0010 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species
Msp_g06742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019955_P001 Zm00001e019955 RGG repeats nuclear RNA binding protein A (Fragment)... 0.03 OrthoFinder output from all 47 species
Zm00001e019958_P002 Zm00001e019958 RGG repeats nuclear RNA binding protein A (Fragment)... 0.05 OrthoFinder output from all 47 species
Zm00001e026661_P002 Zm00001e026661 RGG repeats nuclear RNA binding protein A (Fragment)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019084 Stm1-like_N 1 74
IPR006861 HABP4_PAIRBP1-bd 152 259
No external refs found!