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  5. Solyc01g087620.3.1

Solyc01g087620.3.1 (UBL5, Solyc01g087620)


Aliases : UBL5, Solyc01g087620

Description : ubiquitin-fold protein (HUB)


Gene families : OG0009741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g087620.3.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Ceric.32G020100.1 Ceric.32G020100 HUB ubiquitin-fold protein & original description:... 0.07 OrthoFinder output from all 47 species
LOC_Os11g04880.1 LOC_Os11g04880 ubiquitin-fold protein (HUB) 0.02 OrthoFinder output from all 47 species
MA_21726g0010 No alias ubiquitin-fold protein (HUB) 0.03 OrthoFinder output from all 47 species
Mp3g20810.1 No alias ubiquitin-fold protein (HUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070469 respirasome IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 11 70
No external refs found!