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  5. Solyc01g087250.3.1

Solyc01g087250.3.1 (ATCCD1, CCD1, NCED1,...)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1, Solyc01g087250

Description : carotenoid cleavage dioxygenase (CCD1)


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g087250.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g05406 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aev_g06068 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Als_g18482 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10272.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.06 OrthoFinder output from all 47 species
LOC_Os07g05940.1 ATNCED9, NCED9,... neoxanthin cleavage protein 0.04 OrthoFinder output from all 47 species
MA_10428396g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 59 534
No external refs found!