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  5. Solyc01g081100.3.1

Solyc01g081100.3.1 (Solyc01g081100)


Aliases : Solyc01g081100

Description : transcription factor (bHLH)


Gene families : OG0005877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g081100.3.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.13 OrthoFinder output from all 47 species
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.14 OrthoFinder output from all 47 species
AT2G31215 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.12 OrthoFinder output from all 47 species
Aop_g69486 No alias bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene69047.t1 Aspi01Gene69047 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G094900.1 Ceric.14G094900 bHLH-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.21G089700.1 Ceric.21G089700 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g42960 No alias bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g43850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.09 OrthoFinder output from all 47 species
LOC_Os01g18870.1 LOC_Os01g18870 transcription factor (bHLH) 0.11 OrthoFinder output from all 47 species
LOC_Os04g51070.1 LOC_Os04g51070 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g59537 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
MA_1220g0010 No alias transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Msp_g41404 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30559 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g41320 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43808 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g16733 No alias bHLH-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Sam_g05982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo81013 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Spa_g43678 No alias bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g48416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025435_P001 Zm00001e025435 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 269 316
No external refs found!