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  5. Solyc01g081010.4.1

Solyc01g081010.4.1 (Solyc01g081010)


Aliases : Solyc01g081010

Description : NOG1 LSU processome regulatory GTPase


Gene families : OG0004754 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g081010.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00241220 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Aop_g01799 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
Cba_g68683 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Ceric.01G116000.1 Ceric.01G116000 regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g03970 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Dde_g18132 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g09570.1 LOC_Os06g09570 NOG1 LSU processome regulatory GTPase 0.08 OrthoFinder output from all 47 species
LOC_Os07g01920.1 LOC_Os07g01920 NOG1 LSU processome regulatory GTPase 0.04 OrthoFinder output from all 47 species
Lfl_g02079 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.05 OrthoFinder output from all 47 species
Msp_g14977 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.02 OrthoFinder output from all 47 species
Solyc07g053730.4.1 Solyc07g053730 NOG1 LSU processome regulatory GTPase 0.03 OrthoFinder output from all 47 species
Spa_g09142 No alias regulatory GTPase (NOG1) of LSU processome & original... 0.03 OrthoFinder output from all 47 species
Zm00001e036251_P001 Zm00001e036251 NOG1 LSU processome regulatory GTPase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR010674 NOG1_Rossman_fold_dom 236 292
IPR041623 NOG1_N 6 165
IPR012973 NOG_C 413 466
No external refs found!