LOC_Os03g17760.1


Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 118.0)


Gene families : OG_01_0000639 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000639_tree ,
OG_02_0000548 (LandPlants) Phylogenetic Tree(s): OG_02_0000548_tree ,
OG_03_0000334 (SeedPlants) Phylogenetic Tree(s): OG_03_0000334_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g17760.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT1G22330 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.08 Archaeplastida
AT1G78260 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Archaeplastida
GSVIVT01009045001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_1682g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 Archaeplastida
Mp8g04430.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g082270.3.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 Archaeplastida
Solyc04g049920.4.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.06 Archaeplastida
Solyc04g074310.4.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.06 Archaeplastida
Solyc11g044470.3.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e015892_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e023856_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e028635_P002 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 Archaeplastida
AMTR_s00080p00053460 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 LandPlants
AT1G22330 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 LandPlants
AT3G54770 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
MA_1682g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 LandPlants
MA_3307g0020 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 LandPlants
Mp8g04430.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.01 LandPlants
Solyc04g049920.4.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 LandPlants
Solyc04g074310.4.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 LandPlants
Zm00001e019085_P001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 LandPlants
AT1G22330 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 SeedPlants
MA_1682g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 SeedPlants
Solyc04g049920.4.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 SeedPlants
Solyc04g074310.4.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 SeedPlants
Zm00001e028635_P002 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 35 92
No external refs found!