1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g079970.2.1

Solyc01g079970.2.1 (Solyc01g079970)


Aliases : Solyc01g079970

Description : pepsin-type protease


Gene families : OG0000963 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079970.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00075590 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00079520 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
Adi_g087943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32069 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13074 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38117 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g56733 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0055.g033904 No alias A1-class (Pepsin) protease & original description: CDS=1-1272 0.03 OrthoFinder output from all 47 species
Ceric.02G083800.1 Ceric.02G083800 A1-class (Pepsin) protease & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G041400.1 Ceric.15G041400 A1-class (Pepsin) protease & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.16G051100.1 Ceric.16G051100 A1-class (Pepsin) protease & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G044400.1 Ceric.18G044400 A1-class (Pepsin) protease & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g35999 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017895001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
Gb_01723 No alias pepsin-type protease 0.08 OrthoFinder output from all 47 species
Gb_13049 No alias pepsin-type protease 0.04 OrthoFinder output from all 47 species
Gb_13050 No alias pepsin-type protease 0.04 OrthoFinder output from all 47 species
LOC_Os01g71070.1 LOC_Os01g71070 pepsin-type protease 0.02 OrthoFinder output from all 47 species
LOC_Os01g71090.1 LOC_Os01g71090 pepsin-type protease 0.03 OrthoFinder output from all 47 species
LOC_Os05g33400.1 LOC_Os05g33400 pepsin-type protease 0.03 OrthoFinder output from all 47 species
LOC_Os05g33410.1 LOC_Os05g33410 pepsin-type protease 0.04 OrthoFinder output from all 47 species
LOC_Os05g33420.1 LOC_Os05g33420 pepsin-type protease 0.02 OrthoFinder output from all 47 species
LOC_Os05g33430.1 LOC_Os05g33430 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Len_g12443 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20516 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
MA_10135085g0010 No alias pepsin-type protease 0.03 OrthoFinder output from all 47 species
MA_10426833g0010 No alias no description available(sp|q8s1v1|clp_orysj : 91.3) 0.03 OrthoFinder output from all 47 species
MA_3860g0010 No alias pepsin-type protease 0.03 OrthoFinder output from all 47 species
MA_919732g0010 No alias pepsin-type protease 0.04 OrthoFinder output from all 47 species
MA_96623g0010 No alias no description available(sp|q8s1v1|clp_orysj : 154.0) 0.05 OrthoFinder output from all 47 species
Msp_g32283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27983 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g17470 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10872 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39290 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Smo438360 No alias Protein degradation.peptidase families.aspartic-type... 0.02 OrthoFinder output from all 47 species
Solyc01g079950.3.1 Solyc01g079950 pepsin-type protease 0.05 OrthoFinder output from all 47 species
Solyc01g079960.2.1 Solyc01g079960 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Solyc01g079980.3.1 Solyc01g079980 pepsin-type protease 0.05 OrthoFinder output from all 47 species
Solyc01g080010.2.1 Solyc01g080010 pepsin-type protease 0.05 OrthoFinder output from all 47 species
Solyc02g063480.2.1 Solyc02g063480 pepsin-type protease 0.05 OrthoFinder output from all 47 species
Solyc08g076640.1.1 Solyc08g076640 pepsin-type protease 0.05 OrthoFinder output from all 47 species
Spa_g10531 No alias A1-class (Pepsin) protease & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011394_P001 Zm00001e011394 no description available(sp|q8s1v1|clp_orysj : 254.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR032799 TAXi_C 261 425
IPR032861 TAXi_N 45 221
No external refs found!