LOC_Os03g17634.1


Description : Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana (sp|q8gyl7|pp361_arath : 590.0)


Gene families : OG_01_0006806 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006806_tree ,
OG_02_0007343 (LandPlants) Phylogenetic Tree(s): OG_02_0007343_tree ,
OG_03_0007467 (SeedPlants) Phylogenetic Tree(s): OG_03_0007467_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g17634.1
Cluster HCCA: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.05 Archaeplastida
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 Archaeplastida
Gb_13517 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.02 Archaeplastida
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.04 Archaeplastida
Zm00001e038437_P002 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 Archaeplastida
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.05 LandPlants
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 LandPlants
Gb_13517 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.02 LandPlants
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 LandPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.03 LandPlants
Zm00001e038437_P002 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 LandPlants
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.03 SeedPlants
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 SeedPlants
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.04 SeedPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.02 SeedPlants
Zm00001e038437_P002 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 491 534
IPR002885 Pentatricopeptide_repeat 376 436
IPR002885 Pentatricopeptide_repeat 302 365
IPR002885 Pentatricopeptide_repeat 549 605
No external refs found!