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  5. Solyc01g079560.3.1

Solyc01g079560.3.1 (Solyc01g079560)


Aliases : Solyc01g079560

Description : no hits & (original description: none)


Gene families : OG0004345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004345_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079560.3.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00193040 evm_27.TU.AmTr_v1... B3 domain-containing protein Os11g0197600 OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os12g40090.1 LOC_Os12g40090 transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Pir_g49216 VRN1, REM39 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc00g011660.1.1 Solyc00g011660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc00g500092.1.1 Solyc00g500092 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc00g500221.1.1 Solyc00g500221 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g013995.2.1 Solyc01g013995 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g081780.3.1 Solyc02g081780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g043580.3.1 Solyc03g043580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g045450.3.1 Solyc11g045450 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 25 105
No external refs found!