1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g079535.1.1

Solyc01g079535.1.1 (SAR2, ATSARA1C,...)


Aliases : SAR2, ATSARA1C, ATSAR2, ASAR1, Solyc01g079535

Description : GTPase (Sar1)


Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079535.1.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00037810 SAR2, ATSARA1C,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.06 OrthoFinder output from all 47 species
Adi_g042572 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06865 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15580.t1 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14905 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14906 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001299.13 SAR1, ATSAR1B,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder output from all 47 species
Dcu_g06809 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07979 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g23620.1 SAR2, ATSARA1C,... GTPase (Sar1) 0.09 OrthoFinder output from all 47 species
LOC_Os12g37360.1 SAR2, ATSARA1C,... GTPase (Sar1) 0.03 OrthoFinder output from all 47 species
Len_g02610 No alias small GTPase *(Sar1) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03305 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo179259 SAR2, ATSARA1C,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 OrthoFinder output from all 47 species
Spa_g40971 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017591_P001 SAR2, ATSARA1C,... GTPase (Sar1) 0.06 OrthoFinder output from all 47 species
Zm00001e026263_P001 SAR2, ATSARA1C,... GTPase (Sar1) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 192
No external refs found!