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Aliases : Solyc01g068490
Description : E3 ubiquitin ligase (PUB)
Gene families : OG0000782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000782_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g068490.4.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00118190 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00044540 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g26187 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g02598 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06698 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g20195 | PUB15 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00798 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene57056.t1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g035063 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: CDS=1-1965 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g15268 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g72959 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G001500.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G008100.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G068400.1 | PUB26, Ceric.13G068400 | E3 ubiquitin ligase *(SAUL) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G052400.1 | Ceric.25G052400 | E3 ubiquitin ligase *(SAUL) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g13634 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12042 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14454 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00928 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g00947 | PUB9, ATPUB9 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g01743 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02914 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01000832001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018088001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01038602001 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_00701 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g72000.1 | LOC_Os01g72000 | E3 ubiquitin ligase (PUB) | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g02263 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g26780.1 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g01241 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g14314 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g16039 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g13565 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g10078 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06266 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36509 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41416 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06111 | PUB44, SAUL1, ATPUB44 | E3 ubiquiTin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12195 | No alias | E3 ubiquiTin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29203 | PUB44, SAUL1, ATPUB44 | E3 ubiquiTin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018652_P001 | Zm00001e018652 | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |