Solyc01g067890.4.1 (CLA, DXS, CLA1, DEF,...)

Aliases : CLA, DXS, CLA1, DEF, DXPS2, Solyc01g067890

Description : 1-deoxy-D-xylulose 5-phosphate synthase (DXS)

Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g067890.4.1

Target	Alias	Description	ECC score	Gene Family Method
Ceric.25G018600.1	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Ehy_g14623	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
LOC_Os07g09190.1	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.03	OrthoFinder output from all 47 species
Sam_g06602	No alias	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016744	transketolase or transaldolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005477	Dxylulose-5-P_synthase	76	361
IPR033248	Transketolase_C	577	700
IPR005475	Transketolase-like_Pyr-bd	398	559

External Links

No external refs found!