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  5. Solyc01g067680.3.1

Solyc01g067680.3.1 (AtTLP3, TLP3, Solyc01g067680)


Aliases : AtTLP3, TLP3, Solyc01g067680

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067680.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g35261 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15706 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017810001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.05 OrthoFinder output from all 47 species
LOC_Os04g59130.1 TLP10, AtTLP10,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
LOC_Os05g36190.1 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Smo85745 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
Spa_g18566 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007472_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 98 383
IPR001810 F-box_dom 34 82
No external refs found!