1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g067560.3.1

Solyc01g067560.3.1 (ATALY3, ALY3, Solyc01g067560)


Aliases : ATALY3, ALY3, Solyc01g067560

Description : transcription factor (MYB-related)


Gene families : OG0002386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002386_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067560.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G05380 ATALY2, ALY2 DIRP ;Myb-like DNA-binding domain 0.05 OrthoFinder output from all 47 species
AT3G21430 ATALY3, ALY3 No description available 0.05 OrthoFinder output from all 47 species
AT5G27610 ALY1, ATALY1 DIRP ;Myb-like DNA-binding domain 0.05 OrthoFinder output from all 47 species
Aev_g48648 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.02 OrthoFinder output from all 47 species
Ceric.20G005600.1 ATALY3, ALY3,... MYB-RELATED transcription factor *(ALY) & original... 0.04 OrthoFinder output from all 47 species
Cre13.g570150 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dcu_g07164 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01017770001 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.08 OrthoFinder output from all 47 species
Gb_37435 ATALY3, ALY3 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Mp8g06450.1 ATALY3, ALY3 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Pir_g11837 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.03 OrthoFinder output from all 47 species
Smo420594 ATALY3, ALY3 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 125 160
IPR033471 DIRP 704 804
No external refs found!