Solyc01g067550.3.1 (Solyc01g067550)


Aliases : Solyc01g067550

Description : C3H zinc finger transcription factor


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067550.3.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT2G47850 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Adi_g044815 ZFN2 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Adi_g057709 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g057710 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Adi_g105935 ZFN2 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aev_g04017 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Als_g07334 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35287.t1 Aspi01Gene35287 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59535.t1 ZFN1, Aspi01Gene59535 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dac_g31557 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dac_g43591 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05707 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ehy_g18381 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010980001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
Ore_g03223 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g17909 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000571 Znf_CCCH 52 76
IPR000571 Znf_CCCH 321 344
IPR000571 Znf_CCCH 366 390
IPR000571 Znf_CCCH 143 167
IPR000571 Znf_CCCH 98 122
No external refs found!