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  5. Solyc01g066740.3.1

Solyc01g066740.3.1 (Solyc01g066740)


Aliases : Solyc01g066740

Description : Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus (sp|c6l7u1|lin1_lotja : 261.0)


Gene families : OG0002525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002525_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc01g066740.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00198510 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00231470 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.03 OrthoFinder output from all 47 species
Ala_g02707 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009918001 PUB8, B80 External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
GSVIVT01026271001 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.05 OrthoFinder output from all 47 species
GSVIVT01035145001 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.03 OrthoFinder output from all 47 species
LOC_Os02g07190.1 LOC_Os02g07190 Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.04 OrthoFinder output from all 47 species
LOC_Os05g30010.1 LOC_Os05g30010 Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.04 OrthoFinder output from all 47 species
MA_126120g0010 No alias Putative E3 ubiquitin-protein ligase LIN OS=Medicago... 0.04 OrthoFinder output from all 47 species
Pir_g41495 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1081 1115
No external refs found!