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  5. Solyc01g066360.3.1

Solyc01g066360.3.1 (Solyc01g066360)


Aliases : Solyc01g066360

Description : pectin methylesterase


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g066360.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.13 OrthoFinder output from all 47 species
AMTR_s00033p00227850 evm_27.TU.AmTr_v1... Probable pectinesterase/pectinesterase inhibitor 21... 0.11 OrthoFinder output from all 47 species
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.17 OrthoFinder output from all 47 species
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.15 OrthoFinder output from all 47 species
AMTR_s00129p00070300 PME1, ATPME1,... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT1G11370 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.05 OrthoFinder output from all 47 species
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.11 OrthoFinder output from all 47 species
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT3G05610 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.13 OrthoFinder output from all 47 species
AT3G06830 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.12 OrthoFinder output from all 47 species
AT3G10710 RHS12 root hair specific 12 0.04 OrthoFinder output from all 47 species
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT3G49220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT4G15980 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.11 OrthoFinder output from all 47 species
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.13 OrthoFinder output from all 47 species
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 OrthoFinder output from all 47 species
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.09 OrthoFinder output from all 47 species
Adi_g006880 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g12203 PME1, ATPME1 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g21164 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g24092 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g26378 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32800 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Als_g38529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26087 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g07772 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g11322 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45157.t1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0133.g049315 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0205.g057784 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.16G076000.1 PME44, ATPME44,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G055200.1 Ceric.19G055200 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G055900.1 Ceric.19G055900 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.19G056000.1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.30G008400.1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016400.1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Dac_g13438 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g22798 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g38611 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01562 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Dcu_g12104 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g13634 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Dde_g08691 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02809 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g04854 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07748 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09868 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10683 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g15129 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27713 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016667001 PME1, ATPME1 Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.09 OrthoFinder output from all 47 species
GSVIVT01028265001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.11 OrthoFinder output from all 47 species
GSVIVT01031164001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01031165001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.13 OrthoFinder output from all 47 species
GSVIVT01035108001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_10522 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_21388 ATPMEPCRF, PMEPCRF pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_24214 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_36012 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g15039.1 LOC_Os01g15039 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g20980.1 ATPMEPCRB, LOC_Os01g20980 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g21034.1 ATPME3, PME3,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g65790.1 LOC_Os01g65790 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os02g54190.1 PME61, LOC_Os02g54190 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os03g18860.1 LOC_Os03g18860 pectin methylesterase 0.07 OrthoFinder output from all 47 species
LOC_Os04g38560.1 LOC_Os04g38560 pectin methylesterase 0.08 OrthoFinder output from all 47 species
LOC_Os07g47830.1 ATPME3, PME3,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os07g49100.1 LOC_Os07g49100 pectin methylesterase 0.09 OrthoFinder output from all 47 species
LOC_Os08g34910.1 LOC_Os08g34910 pectin methylesterase 0.1 OrthoFinder output from all 47 species
LOC_Os09g26360.1 LOC_Os09g26360 pectin methylesterase 0.11 OrthoFinder output from all 47 species
LOC_Os11g36240.1 LOC_Os11g36240 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_54974g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_84680g0010 ATPME2, PME2 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp6g15150.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp8g00060.1 ATPME2, PME2 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Mp8g09330.1 RHS12 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Msp_g25874 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13298 No alias EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Ore_g20165 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Pir_g18600 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pp3c8_3840V3.1 Pp3c8_3840 Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
Ppi_g12664 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ppi_g31109 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g55328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018433 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021279 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Smo114014 ATPMEPCRF, PMEPCRF Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Smo154356 ATPMEPCRA, PMEPCRA Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Smo266995 ATPME2, PME2 Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc01g057220.3.1 Solyc01g057220 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc02g014300.2.1 Solyc02g014300 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc03g123620.4.1 PME1, ATPME1,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc07g017600.3.1 PME44, ATPME44,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc09g075330.4.1 Solyc09g075330 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g21251 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Spa_g42089 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Tin_g14828 No alias EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007917_P002 Zm00001e007917 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Zm00001e009863_P001 Zm00001e009863 pectin methylesterase 0.1 OrthoFinder output from all 47 species
Zm00001e017514_P001 ATPMEPCRB, Zm00001e017514 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e034231_P001 Zm00001e034231 pectin methylesterase 0.11 OrthoFinder output from all 47 species
Zm00001e035932_P003 Zm00001e035932 pectin methylesterase 0.13 OrthoFinder output from all 47 species
Zm00001e041006_P001 Zm00001e041006 pectin methylesterase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 49 196
IPR000070 Pectinesterase_cat 241 537
No external refs found!