Solyc01g057270.4.1 (CAMTA3, SR1, Solyc01g057270)

Aliases : CAMTA3, SR1, Solyc01g057270

Description : transcription factor (CAMTA)

Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc01g057270.4.1
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0117.g046489	No alias	CAMTA-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g14067	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435485g0010	EICBP.B, CAMTA1	transcription factor (CAMTA)	0.02	OrthoFinder output from all 47 species
Sam_g07183	No alias	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0016579	protein deubiquitination	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005559	CG-1_dom	18	130
IPR002909	IPT_dom	404	486
IPR020683	DUF3447	617	695

External Links

No external refs found!