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Aliases : Solyc01g057260
Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana (sp|q9sd53|y3720_arath : 94.4)
Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00023p00153750 | evm_27.TU.AmTr_v1... | UPF0481 protein At3g47200 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00023p00153970 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00023p00171820 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00171210 | evm_27.TU.AmTr_v1... | Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT2G36430 | No alias | Plant protein of unknown function (DUF247) | 0.05 | OrthoFinder output from all 47 species | |
| AT3G47250 | No alias | Plant protein of unknown function (DUF247) | 0.03 | OrthoFinder output from all 47 species | |
| AT3G50140 | No alias | Plant protein of unknown function (DUF247) | 0.03 | OrthoFinder output from all 47 species | |
| AT3G50160 | No alias | Plant protein of unknown function (DUF247) | 0.05 | OrthoFinder output from all 47 species | |
| AT3G60470 | No alias | Plant protein of unknown function (DUF247) | 0.02 | OrthoFinder output from all 47 species | |
| AT5G11290 | No alias | Plant protein of unknown function (DUF247) | 0.03 | OrthoFinder output from all 47 species | |
| AT5G22540 | No alias | Plant protein of unknown function (DUF247) | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20032 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g03111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06779 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g33018 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12181 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g30226 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02375 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14217 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21830 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene22023.t1 | Aspi01Gene22023 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene48410.t1 | Aspi01Gene48410 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene49158.t1 | Aspi01Gene49158 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene53577.t1 | Aspi01Gene53577 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene72942.t1 | Aspi01Gene72942 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g23793 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g15318 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16644 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g09597 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15720 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26830 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11110 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01001131001 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01033580001 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035820001 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01035823001 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11125 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15961 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20041 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20047 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23451 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_28287 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_34674 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_34677 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36111 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37280 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_37283 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41229 | No alias | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g33394.1 | LOC_Os11g33394 | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g33970.1 | LOC_Os11g33970 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g29650.1 | LOC_Os12g29650 | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18264 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g28160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g42582 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_10426384g0010 | No alias | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14823 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29315 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g55892 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g57526 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g65800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g09735 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02170 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32235 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012180 | No alias | not classified & original description: CDS=1-1593 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0166.g024154 | No alias | not classified & original description: CDS=1-2307 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g008900.4.1 | Solyc04g008900 | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc09g009230.2.1 | Solyc09g009230 | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g10857 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g25794 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g26898 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g27969 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28183 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e014020_P001 | Zm00001e014020 | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e023471_P002 | Zm00001e023471 | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024232_P001 | Zm00001e024232 | UPF0481 protein At3g47200 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036342_P001 | Zm00001e036342 | Putative UPF0481 protein At3g02645 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |