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  5. Solyc01g049810.4.1

Solyc01g049810.4.1 (Solyc01g049810)


Aliases : Solyc01g049810

Description : Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana (sp|q9fma1|pp433_arath : 476.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g049810.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g003839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02319.t1 Aspi01Gene02319 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g23754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26885 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g00981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03909 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19438 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Len_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33773 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38362 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Pir_g12577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12264 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000612 No alias not classified & original description: CDS=302-3289 0.02 OrthoFinder output from all 47 species
Smo92231 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 167 193
IPR002885 Pentatricopeptide_repeat 301 324
IPR002885 Pentatricopeptide_repeat 394 425
IPR002885 Pentatricopeptide_repeat 329 374
IPR002885 Pentatricopeptide_repeat 223 273
No external refs found!