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  5. AMTR_s00066p00203490

AMTR_s00066p00203490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.274

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0000506 (LandPlants) Phylogenetic Tree(s): OG_02_0000506_tree ,
OG_03_0001067 (SeedPlants) Phylogenetic Tree(s): OG_03_0001067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00203490
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Gb_37740 No alias RING-v-class E3 ligase 0.03 Archaeplastida
LOC_Os01g49280.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Zm00001e026209_P003 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Zm00001e031477_P002 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.03 LandPlants
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 66 111
IPR022143 DUF3675 117 233
No external refs found!