LOC_Os03g16450.1


Description : Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana (sp|q9fgr2|pp436_arath : 355.0)


Gene families : OG_01_0011611 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011611_tree ,
OG_02_0018340 (LandPlants) Phylogenetic Tree(s): OG_02_0018340_tree ,
OG_03_0017964 (SeedPlants) Phylogenetic Tree(s): OG_03_0017964_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g16450.1
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018393001 No alias Pentatricopeptide repeat-containing protein At1g09410,... 0.09 Archaeplastida
Zm00001e030731_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 287 333
IPR002885 Pentatricopeptide_repeat 116 161
IPR002885 Pentatricopeptide_repeat 87 113
IPR002885 Pentatricopeptide_repeat 362 385
IPR002885 Pentatricopeptide_repeat 261 286
No external refs found!