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  5. Solyc01g014230.4.1

Solyc01g014230.4.1 (Solyc01g014230)


Aliases : Solyc01g014230

Description : U-box domain-containing protein 4 OS=Arabidopsis thaliana (sp|o22193|pub4_arath : 791.0)


Gene families : OG0001662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g014230.4.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00049340 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G67340 No alias ARM repeat superfamily protein 0.09 OrthoFinder output from all 47 species
Azfi_s0076.g037929 No alias E3 ubiquitin ligase & original description: CDS=24-2345 0.05 OrthoFinder output from all 47 species
Azfi_s0162.g054149 No alias E3 ubiquitin ligase & original description: CDS=5-2575 0.02 OrthoFinder output from all 47 species
Cba_g01285 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12238 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G022700.1 Ceric.27G022700 E3 ubiquitin ligase & original description:... 0.09 OrthoFinder output from all 47 species
Ceric.33G024400.1 Ceric.33G024400 E3 ubiquitin ligase & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g09075 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08821 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01391 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24860 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000169001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01028347001 No alias U-box domain-containing protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24127 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_37110 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_38670 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g01900.1 LOC_Os08g01900 U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g12539 No alias E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
MA_10339816g0010 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10426386g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_588533g0010 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp4g07620.1 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g26671 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08665 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017707 No alias E3 ubiquitin ligase & original description: CDS=1-2364 0.03 OrthoFinder output from all 47 species
Sam_g36927 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51937 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39011 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021871_P001 Zm00001e021871 U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e029161_P003 Zm00001e029161 U-box domain-containing protein 4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 229 298
IPR000225 Armadillo 559 596
IPR000225 Armadillo 682 718
IPR000225 Armadillo 641 678
No external refs found!