1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g011000.3.1

Solyc01g011000.3.1 (EIF-5A, ELF5A-1,...)


Aliases : EIF-5A, ELF5A-1, EIF5A, ATELF5A-1, Solyc01g011000

Description : poly-P/G elongation factor (eEF5/eIF5A)


Gene families : OG0000704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g011000.3.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00207570 EIF-5A, ELF5A-1,... Protein biosynthesis.translation elongation.eEF5(eIF5A)... 0.02 OrthoFinder output from all 47 species
AT1G26630 ATELF5A-2, FBR12, ELF5A-2 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein 0.07 OrthoFinder output from all 47 species
Als_g07925 EIF-5A, ELF5A-1,... poly-P/G elongation factor *(eEF5/eIF5A)) & original... 0.03 OrthoFinder output from all 47 species
Cba_g62138 EIF-5A, ELF5A-1,... poly-P/G elongation factor *(eEF5/eIF5A)) & original... 0.02 OrthoFinder output from all 47 species
Gb_08936 EIF-5A, ELF5A-1,... poly-P/G elongation factor (eEF5/eIF5A) 0.03 OrthoFinder output from all 47 species
Mp6g19610.1 EIF-5A, ELF5A-1,... poly-P/G elongation factor (eEF5/eIF5A) 0.03 OrthoFinder output from all 47 species
Sam_g19417 No alias poly-P/G elongation factor *(eEF5/eIF5A)) & original... 0.02 OrthoFinder output from all 47 species
Sam_g21369 No alias poly-P/G elongation factor *(eEF5/eIF5A)) & original... 0.03 OrthoFinder output from all 47 species
Solyc04g005510.3.1 EIF-5A, ELF5A-1,... poly-P/G elongation factor (eEF5/eIF5A) 0.05 OrthoFinder output from all 47 species
Solyc07g005560.3.1 EIF-5A, ELF5A-1,... poly-P/G elongation factor (eEF5/eIF5A) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003746 translation elongation factor activity IEA Interproscan
MF GO:0043022 ribosome binding IEA Interproscan
BP GO:0045901 positive regulation of translational elongation IEA Interproscan
BP GO:0045905 positive regulation of translational termination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR020189 Transl_elong_IF5A_C 85 154
No external refs found!