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Aliases : Solyc01g010540
Description : component RPS9 of SSU proteome
Gene families : OG0001396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001396_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G15200 | No alias | Ribosomal protein S4 | 0.33 | OrthoFinder output from all 47 species | |
| Adi_g043204 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g066051 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g089470 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g123983 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g06508 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g15543 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Als_g18137 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g00657 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04820 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g06152 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.13 | OrthoFinder output from all 47 species | |
| Aspi01Gene14214.t1 | Aspi01Gene14214 | component *(uS4) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037857 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0276.g061449 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0400.g068238 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g08584 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g21305 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34731 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g37185 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G104600.1 | Ceric.04G104600 | component *(uS4) of small ribosomal-subunit (SSU)... | 0.27 | OrthoFinder output from all 47 species | |
| Ceric.20G045700.1 | Ceric.20G045700 | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000826.24 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Cre08.g359750 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.21 | OrthoFinder output from all 47 species | |
| Dac_g05573 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g13577 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.23 | OrthoFinder output from all 47 species | |
| Dde_g04186 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15177 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15335 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008028001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01011384001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.28 | OrthoFinder output from all 47 species | |
| GSVIVT01020020001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_41315 | No alias | component RPS9 of SSU proteome | 0.19 | OrthoFinder output from all 47 species | |
| LOC_Os03g05980.1 | LOC_Os03g05980 | component RPS9 of SSU proteome | 0.25 | OrthoFinder output from all 47 species | |
| LOC_Os11g38959.1 | LOC_Os11g38959 | component RPS9 of SSU proteome | 0.22 | OrthoFinder output from all 47 species | |
| Len_g10000 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18169 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g28416 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10429805g0030 | No alias | component RPS9 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| MA_10431745g0020 | No alias | component RPS9 of SSU proteome | 0.09 | OrthoFinder output from all 47 species | |
| Mp3g00520.1 | No alias | component RPS9 of SSU proteome | 0.32 | OrthoFinder output from all 47 species | |
| Mp6g10930.1 | No alias | component RPS9 of SSU proteome | 0.25 | OrthoFinder output from all 47 species | |
| Msp_g17653 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g37588 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g05644 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g11040 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.11 | OrthoFinder output from all 47 species | |
| Ore_g33669 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g33670 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g02692 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07949 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g48916 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c12_9190V3.1 | Pp3c12_9190 | Ribosomal protein S4 | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c13_19780V3.1 | Pp3c13_19780 | Ribosomal protein S4 | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c3_23720V3.1 | Pp3c3_23720 | Ribosomal protein S4 | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c4_15290V3.1 | Pp3c4_15290 | Ribosomal protein S4 | 0.17 | OrthoFinder output from all 47 species | |
| Ppi_g27129 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57688 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0081.g018027 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0187.g025128 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g09460 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Sam_g13332 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24238 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Smo157263 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.15 | OrthoFinder output from all 47 species | |
| Smo74302 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g05705 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.18 | OrthoFinder output from all 47 species | |
| Spa_g05706 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Spa_g11414 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g19070 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.14 | OrthoFinder output from all 47 species | |
| Spa_g36945 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g09675 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.15 | OrthoFinder output from all 47 species | |
| Tin_g13815 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.17 | OrthoFinder output from all 47 species | |
| Tin_g20253 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e010819_P002 | Zm00001e010819 | component RPS9 of SSU proteome | 0.27 | OrthoFinder output from all 47 species | |
| Zm00001e018345_P001 | Zm00001e018345 | component RPS9 of SSU proteome | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e037961_P002 | Zm00001e037961 | component RPS9 of SSU proteome | 0.21 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0019843 | rRNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |